Connecting Dots Across Asia's Tech and Urban Landscape
Connecting Dots Across Asia's Tech and Urban Landscape

Singapore Scientists To Help Develop Asian Immune Diversity Atlas, With Support From The Chan Zuckerberg Initiative

With the goal of supporting the science and technology that will make it possible to cure, prevent, or manage all diseases by the end of this century, a philanthropic organisation founded by Dr Priscilla Chan and Mark Zuckerberg in 2015, awarded its first Asian research network grant. It was awarded to a team of scientists from Singapore, Japan, and the Republic of Korea, for their study titled “Asian Immune Diversity Atlas (AIDA)”. The team from the Agency for Science, Technology and Research’s (A*STAR’s) Genome Institute of Singapore (GIS), RIKEN, and Samsung Medical Centre, aims to identify differences in the molecular properties of blood cells across five major Asian population groups – Chinese, Japanese, Korean, Indian, and Malay. In addition, AIDA will study differences between individuals of the same ethnicity living in different countries. The results from this work could help us understand why some populations, or some individuals within a population, are more susceptible to certain diseases, and could also pave the way for new blood-based diagnostic tests.

Genome Institute of Singapore CZI-AIDA Team
Group photo of the AIDA team in GIS (from left): Dr Shvetha Sankaran, Dr Nirmala Arul Rayan, Dr Deepa Rajagopalan, Dr Shyam Prabhakar, Mr Honardoost Mohammad Amin. (Copyright: A*STAR’s Genome Institute of Singapore)

The Chan Zuckerberg Initiative has funded this study as part of the international Human Cell Atlas (HCA) collaboration, which brings together the best scientific minds in the world to map and characterise all cell types in a healthy human body, to better understand the drivers of health and disease. The HCA has set an ambitious goal of characterising cells from diverse populations all around the world. As the flagship project of HCA-Asia, AIDA will capture data reflecting the genetic diversity of Asian populations.

AIDA, led by Dr Shyam Prabhakar (GIS), Dr Jay Shin (RIKEN), and Prof Woong Yang Park (Samsung Medical Centre), will expand the geographical scope of the HCA by defining an atlas of Asian immune cell types and states, and characterising their variations associated with ethnicity, environment, age, sex, and body mass index. While the immune system is critical in fighting germs and cancer, it is also the culprit in autoimmune diseases, in which immune cells attack an individual’s own tissues. Thus, the data generated by AIDA will be of fundamental importance for understanding how and why people differ in their disease susceptibility and response to pathogens. The study will include development of novel algorithms that integrate data generated at multiple sites to comprehensively define the properties of each cell type in human blood.

Dr Prabhakar, Associate Director of Spatial and Single Cell Systems at GIS, said, “By comprehensively characterising blood cells from over five hundred Asians, this study will lay the foundation for developing a new kind of personalised medicine.”

Prof Patrick Tan, Executive Director of GIS, said, “This regional collaboration is in line with GIS’ vision to pursue the integration of technology, genetics and biology towards academic, economic and societal impact. It will help Singapore researchers develop new methods for diagnosing, monitoring, and eventually treating a whole range of diseases related to the immune system, including autoimmune disorders, infectious diseases, cancer, and potentially even some developmental disorders.”

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